STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD1PiggyBac transposable element derived 1. (808 aa)    
Predicted Functional Partners:
TNK1
Tyrosine kinase non receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
      
 0.639
SRPK2
SRSF protein kinase 2.
    
 
 0.626
PGBD5
PiggyBac transposable element derived 5.
    
 
0.608
ZNF862
Zinc finger protein 862.
  
   
 0.529
SCAND1
SCAN domain containing 1.
    
  
0.528
ZNF446
Zinc finger protein 446.
    
  
0.527
ZNF24
Zinc finger protein 24.
    
  
0.525
ZSCAN32
Zinc finger and SCAN domain containing 32.
    
  
0.523
ZKSCAN3
Zinc finger with KRAB and SCAN domains 3.
    
 
0.508
ZSCAN1
Zinc finger and SCAN domain containing 1.
    
  
0.493
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.