STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKNOX1PBX/knotted 1 homeobox 1. (319 aa)    
Predicted Functional Partners:
PBX1
PBX homeobox 1.
    
0.931
PBX4
PBX homeobox 4.
    
0.823
PBX2
PBX homeobox 2.
    
0.813
KLF14
Kruppel like factor 14.
   
 
 0.691
HOXB1
Homeobox B1.
   
 0.681
LCORL
Ligand dependent nuclear receptor corepressor like.
   
  
 0.670
PBX3
Homeobox domain-containing protein.
    
0.642
VGLL3
Vestigial like family member 3.
      
 0.544
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
   
  
 0.540
RPL7L1
Uncharacterized protein.
      
 0.524
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.