Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBN3Fibrillin 3. (2776 aa)    
Predicted Functional Partners:
FBN1
Fibrillin 1.
  
0.968
FBN2
Fibrillin 2.
  
 
0.925
ENSCSAP00000018003
Uncharacterized protein.
    
   0.712
LUM
Lumican.
   
 0.675
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
   
 0.650
PCSK4
Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family.
   
 0.648
MFAP2
Microfibril associated protein 2.
   
 0.633
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.608
COL6A1
Uncharacterized protein.
   
 0.589
COL6A2
Collagen type VI alpha 2 chain.
   
 0.584
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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