STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBDUbiquitin D. (165 aa)    
Predicted Functional Partners:
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 0.944
NUB1
Negative regulator of ubiquitin like proteins 1.
    
 0.942
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.851
UBE2Z
Ubiquitin conjugating enzyme E2 Z.
    
 0.831
MAD2L1
HORMA domain-containing protein.
   
  0.826
ENSCSAP00000013550
PROTEASOME_ALPHA_1 domain-containing protein.
   
 0.821
RPS28
Uncharacterized protein.
   
 0.816
UBXN7
UBX domain protein 7.
    
 0.805
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.786
ENSCSAP00000018444
Ubiquitin-like domain-containing protein.
  
 0.779
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.