STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BANF1Barrier to autointegration factor 1. (89 aa)    
Predicted Functional Partners:
EMD
Emerin.
    
 0.992
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
    
 0.951
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
 0.891
TMPO
Uncharacterized protein.
    
 0.879
VRK2
VRK serine/threonine kinase 2.
    
 0.861
LEMD3
LEM domain containing 3.
    
 0.851
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.845
ANKLE2
Ankyrin repeat and LEM domain containing 2.
    
 0.839
LMNB1
Lamin B1; Belongs to the intermediate filament family.
    
 0.829
RBM39
RNA binding motif protein 39.
    
 0.741
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.