STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF39Ring finger protein 39. (420 aa)    
Predicted Functional Partners:
ZNRD1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
      
 0.847
LY6K
Lymphocyte antigen 6 family member K.
      
 0.823
LY6H
Lymphocyte antigen 6 family member H.
      
 0.820
SLURP1
Secreted LY6/PLAUR domain containing 1.
      
 0.793
TCF19
Transcription factor 19.
      
 0.699
ID1
Inhibitor of DNA binding 1, HLH protein.
    
 
 0.623
ABCF1
ATP binding cassette subfamily F member 1.
    
 
 0.581
ENSCSAP00000004665
POU domain protein.
    
 0.544
POU5F2
POU domain class 5, transcription factor 2.
    
 0.544
CCHCR1
Coiled-coil alpha-helical rod protein 1.
    
 
 0.477
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.