STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM40Tripartite motif containing 40. (225 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
    
 0.636
ENSCSAP00000004751
Ig-like domain-containing protein.
      
 0.626
TRIM23
Tripartite motif containing 23.
    
 0.556
RNF207
Ring finger protein 207.
      
 0.528
TRIM65
Tripartite motif containing 65.
      
 0.490
LY6G5C
Lymphocyte antigen 6 family member G5C.
      
 0.485
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.472
IFIH1
Interferon induced with helicase C domain 1.
    
 0.453
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.441
C6orf15
Chromosome 6 open reading frame 15.
  
   
 0.437
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.