STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PACS1Phosphofurin acidic cluster sorting protein 1. (962 aa)    
Predicted Functional Partners:
WDR37
WD repeat domain 37.
    
 
 0.960
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
 
 0.637
MRPL38
Mitochondrial ribosomal protein L38.
      
 0.552
TMEM33
Transmembrane protein 33.
      
 0.521
RABIF
RAB interacting factor.
      
 0.506
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
      
 0.506
GMPPA
GDP-mannose pyrophosphorylase A.
      
 0.497
ENSCSAP00000004608
RRM domain-containing protein.
      
 0.486
SNX24
Sorting nexin 24.
    
   0.484
PKD2
Polycystin 2, transient receptor potential cation channel.
      
 0.480
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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