STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PARNPoly(A)-specific ribonuclease. (639 aa)    
Predicted Functional Partners:
DCP2
Decapping mRNA 2.
     
 0.922
DHX37
DEAH-box helicase 37.
    
 
 0.912
PNLDC1
PARN like, ribonuclease domain containing 1.
     
0.906
XRN1
5'-3' exoribonuclease 1.
    
 
 0.795
BYSL
Bystin like.
   
 
 0.782
FAM207A
Family with sequence similarity 207 member A.
    
 
 0.776
RMI2
RecQ mediated genome instability 2.
      
 0.724
KHSRP
KH-type splicing regulatory protein.
   
 0.718
TEKT5
Tektin 5.
      
 0.702
EXOSC5
Exosome component 5.
    
 0.689
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.