STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YIF1AYip1 interacting factor homolog A, membrane trafficking protein. (293 aa)    
Predicted Functional Partners:
YIPF5
Protein YIPF.
   
 
 0.939
YIPF7
Protein YIPF.
   
 
 0.824
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
   0.807
RABAC1
PRA1 family protein.
   
 
 0.722
YIPF4
Protein YIPF.
   
 
 0.686
SELENOS
Selenoprotein S.
   
 
 0.612
MAEA
Macrophage erythroblast attacher.
   
 
 0.586
PHKA2
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
      
 0.574
VAPA
VAMP associated protein A.
    
 
 0.539
RAB1A
Uncharacterized protein.
   
 
 0.530
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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