STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKZF1Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1. (726 aa)    
Predicted Functional Partners:
NEMF
Nuclear export mediator factor.
   
 0.865
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.720
LTN1
Listerin E3 ubiquitin protein ligase 1.
    
 0.679
ERMN
Ermin.
   
 0.646
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 0.638
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
      
 0.618
SPATA5
Uncharacterized protein.
   
 0.601
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.601
ENSCSAP00000014414
AAA_lid_3 domain-containing protein.
   
 0.601
UBE4A
Ubiquitination factor E4A.
    
 
 0.569
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.