STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC1Transmembrane channel-like protein. (761 aa)    
Predicted Functional Partners:
CLCA2
Chloride channel accessory 2.
      
 0.928
COL10A1
Collagen type X alpha 1 chain.
    
 0.869
WFS1
Wolframin ER transmembrane glycoprotein.
    
 
 0.866
OTOF
Otoferlin.
   
 
 0.863
RPGRIP1L
RPGRIP1 like.
    
 0.861
CIB2
Calcium and integrin binding family member 2.
    
 0.858
SLC52A3
Solute carrier family 52 member 3.
      
 0.848
SRRM4
Serine/arginine repetitive matrix 4.
    
 0.845
CIB3
Calcium and integrin binding family member 3.
    
 0.842
STOX1
Storkhead box 1.
      
 0.835
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.