STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF17TNF receptor superfamily member 17. (185 aa)    
Predicted Functional Partners:
TNFSF13B
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
    
 0.995
MZB1
Marginal zone B and B1 cell specific protein.
   
  
 0.980
POU2AF1
POU class 2 homeobox associating factor 1.
   
 
 0.857
JCHAIN
Joining chain of multimeric IgA and IgM.
   
  
 0.853
TNFRSF13B
TNF receptor superfamily member 13B.
   
  
 0.743
TNFRSF13C
TNF receptor superfamily member 13C.
      
 0.613
TNFSF12
TNFSF12-TNFSF13 readthrough; Belongs to the tumor necrosis factor family.
    
 0.558
CD27
CD27 molecule.
   
  
 0.536
CD79A
CD79a molecule.
   
  
 0.503
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
      
 0.494
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.