STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HMGXB4HMG-box containing 4. (601 aa)    
Predicted Functional Partners:
BPTF
Bromodomain PHD finger transcription factor.
    
  0.861
C17orf49
Chromosome 17 open reading frame 49.
    
 0.851
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.848
NCOR1
Nuclear receptor corepressor 1.
    
   0.771
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
    
 0.738
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
  0.717
BRD3
Bromodomain containing 3.
   
   0.692
ZMIZ2
Zinc finger MIZ-type containing 2.
   
  
 0.680
CCDC30
Coiled-coil domain containing 30.
      
 0.677
TOM1
Target of myb1 membrane trafficking protein; Belongs to the TOM1 family.
      
 0.671
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.