STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ISXIntestine specific homeobox. (300 aa)    
Predicted Functional Partners:
BCO1
Beta-carotene oxygenase 1.
      
 0.729
DBP
D-box binding PAR bZIP transcription factor.
      
 0.595
DCK
Deoxycytidine kinase.
    
   0.555
PLAAT1
Phospholipase A and acyltransferase 1.
    
 
 0.487
BCO2
Beta-carotene oxygenase 2.
      
 0.486
SCARB1
Scavenger receptor class B member 1; Belongs to the CD36 family.
      
 0.484
PLAAT5
Phospholipase A and acyltransferase 5.
      
 0.471
LRATD1
LRAT domain containing 1.
      
 0.456
LRATD2
LRAT domain containing 2.
      
 0.456
PRDM9
Uncharacterized protein.
   
 0.455
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.