STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF130Ring finger protein 130. (420 aa)    
Predicted Functional Partners:
RNF223
Ring finger protein 223.
     
 0.697
RNFT2
Ring finger protein, transmembrane 2.
      
 0.693
CGRRF1
RING-type domain-containing protein.
     
 0.692
RNF183
Ring finger protein 183.
     
 0.687
RNFT1
Ring finger protein, transmembrane 1.
      
 0.675
RNF145
Ring finger protein 145.
    
 
 0.658
RNF144A
RBR-type E3 ubiquitin transferase.
     
 0.649
RNF144B
RBR-type E3 ubiquitin transferase.
     
 0.649
TMEM129
Transmembrane protein 129.
      
 0.647
RNF121
Ring finger protein 121.
      
 0.646
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.