STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LCA5LLebercilin LCA5 like. (670 aa)    
Predicted Functional Partners:
GARS1
Glycyl-tRNA synthetase.
    
   0.712
PSMG1
Proteasome assembly chaperone 1; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2.
      
 0.666
MTMR9
Myotubularin related protein 9.
      
 0.665
CCM2
CCM2 scaffold protein.
    
 
 0.592
SH3BGR
SH3 domain binding glutamate rich protein.
      
 0.521
XKR6
XK-related protein.
      
 0.520
ENSCSAP00000012952
XK-related protein.
      
 0.520
B3GALT1
Hexosyltransferase.
   
  
 0.469
B3GALT5
Hexosyltransferase.
   
  
 0.469
NME8
NME/NM23 family member 8.
    
 
 0.441
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.