STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACTN3Actinin alpha 3 (gene/pseudogene). (901 aa)    
Predicted Functional Partners:
ACTN2
Actinin alpha 2.
  
 
0.999
ACTN1
Actinin alpha 1.
   
 0.964
ACTN4
Actinin alpha 4.
   
 0.954
TNNC2
Troponin C2, fast skeletal type.
   
 0.907
MYOZ1
Myozenin 1.
   
 
 0.901
TNNI2
Troponin I2, fast skeletal type.
   
 0.895
MYOM2
Myomesin 2.
   
 0.893
MYOZ2
Myozenin 2.
   
 
 0.843
TCAP
Titin-cap.
   
 
 0.827
CASQ1
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.808
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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