STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPROProtein tyrosine phosphatase receptor type O. (1023 aa)    
Predicted Functional Partners:
EPHA5
EPH receptor A5.
   
 0.725
EPHA3
EPH receptor A3.
   
 0.702
EFNA5
Ephrin A5; Belongs to the ephrin family.
    
 
 0.681
PTS
6-pyruvoyl tetrahydrobiopterin synthase.
    
 
 0.633
EPHB2
EPH receptor B2.
   
 0.633
EPHA4
EPH receptor A4.
   
 0.631
NPHS2
NPHS2 stomatin family member, podocin.
   
 0.542
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.504
KIRREL1
Kirre like nephrin family adhesion molecule 1.
    
 0.494
CDH5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.490
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.