STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ERP27Endoplasmic reticulum protein 27. (187 aa)    
Predicted Functional Partners:
EEF1D
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
    
 
 0.777
FOXA1
Forkhead box A1.
    
 
 0.768
PDIA3
Protein disulfide-isomerase.
   
 0.758
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.757
CARS1
Cysteinyl-tRNA synthetase.
  
   0.712
PDE6H
Phosphodiesterase 6H.
      
 0.673
BCAT1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
      
 0.671
CLSTN3
Calsyntenin 3.
      
 0.638
CALR
Calreticulin.
   
 0.635
CREBRF
CREB3 regulatory factor.
    
 0.634
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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