Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCHCR1Coiled-coil alpha-helical rod protein 1. (782 aa)    
Predicted Functional Partners:
IQCC
IQ motif containing C.
    
 
 0.773
CDSN
Corneodesmosin.
  
   
 0.720
FAM187B
Family with sequence similarity 187 member B.
      
 0.671
CBY2
Spermatid associated.
    
 
 0.624
ENSCSAP00000004665
POU domain protein.
   
 
 0.619
POU5F2
POU domain class 5, transcription factor 2.
   
 
 0.619
WASHC3
WASH complex subunit 3.
    
   0.585
ID1
Inhibitor of DNA binding 1, HLH protein.
      
 0.576
KRT73
Keratin 73; Belongs to the intermediate filament family.
      
 0.574
TCF19
Transcription factor 19.
      
 0.563
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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