STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPH1Heterogeneous nuclear ribonucleoprotein H1. (423 aa)    
Predicted Functional Partners:
ENSCSAP00000004881
RRM domain-containing protein.
   
 0.743
PTBP2
Polypyrimidine tract binding protein 2.
   
 0.741
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.711
ILF2
Uncharacterized protein.
   
 
 0.703
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.655
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.652
FUBP1
Far upstream element binding protein 1.
   
 
 0.649
CPSF1
Cleavage and polyadenylation specific factor 1.
   
  
 0.648
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 
 0.645
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.641
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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