STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM228AFamily with sequence similarity 228 member A. (206 aa)    
Predicted Functional Partners:
VPS35L
VPS35 endosomal protein sorting factor like.
      
 0.525
SPATA17
Spermatogenesis associated 17.
   
 
 0.501
FAM135B
Family with sequence similarity 135 member B.
      
 0.486
STOML2
Stomatin like 2.
      
 0.461
GSKIP
GSK3B interacting protein.
      
 0.460
MINDY4
MINDY lysine 48 deubiquitinase 4.
      
 0.460
CFAP69
Cilia and flagella associated protein 69.
   
   0.453
CFAP20
Cilia and flagella associated protein 20.
    
   0.420
MYCBPAP
MYCBP associated protein.
    
   0.420
MAP1S
Microtubule associated protein 1S.
    
   0.420
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.