STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KDM2ALysine demethylase 2A. (1145 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.936
KDM2B
Lysine demethylase 2B.
    
0.916
PCGF1
Polycomb group ring finger 1.
   
 0.822
H2AC20
Histone H2A; Belongs to the histone H2A family.
    
 0.800
H2AW
Histone H2A; Belongs to the histone H2A family.
    
 0.787
H2AC6
Histone H2A; Belongs to the histone H2A family.
    
 0.787
H2AJ
Histone H2A; Belongs to the histone H2A family.
    
 0.787
H2BC5
Histone H2B; Belongs to the histone H2B family.
    
 0.776
HIST1H2BO
Histone H2B; Belongs to the histone H2B family.
    
  0.766
RBX1
Ring-box 1.
    
 0.765
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.