STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RUBCNRubicon autophagy regulator. (1011 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance associated.
    
 0.997
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.957
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
    
 
 0.934
BECN1
Beclin 1.
    
 
 0.834
BECN2
Beclin 2.
    
 
 0.834
EGFR
Receptor protein-tyrosine kinase.
    
 
 0.789
RAB7A
RAB7A, member RAS oncogene family.
    
 
 0.764
ATG14
Autophagy related 14.
    
 
 0.737
C22orf39
Chromosome 22 open reading frame 39.
      
 0.596
NADK
NAD kinase.
      
 0.586
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.