STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM249Transmembrane protein 249. (234 aa)    
Predicted Functional Partners:
TMEM262
Transmembrane protein 262.
    
 
 0.832
CATSPERE
Catsper channel auxiliary subunit epsilon.
  
 
 
 0.788
CATSPER4
Cation channel sperm associated 4.
    
 
 0.763
CATSPERZ
Catsper channel auxiliary subunit zeta.
    
 
 0.697
EFCAB9
EF-hand calcium binding domain 9.
    
 
 0.691
CATSPER1
Cation channel sperm associated 1.
    
 
 0.589
CATSPER2
Cation channel sperm associated 2.
    
 
 0.564
CATSPER3
Cation channel sperm associated 3.
    
 
 0.555
SLCO6A1
Solute carrier organic anion transporter family member.
    
 
 0.526
SLCO4C1
Solute carrier organic anion transporter family member.
    
 
 0.526
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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