STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (390 aa)    
Predicted Functional Partners:
RAD1
RAD1 checkpoint DNA exonuclease.
    
 0.999
ATR
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.990
HUS1
Checkpoint protein; Belongs to the HUS1 family.
    
 0.990
RAD17
RAD17 checkpoint clamp loader component.
   
 0.987
TOPBP1
DNA topoisomerase II binding protein 1.
    
 0.978
RAD9B
Cell cycle checkpoint control protein; Belongs to the rad9 family.
  
  
0.941
RFC2
Replication factor C subunit 2.
   
 0.932
RFC5
Replication factor C subunit 5.
   
 0.910
ATM
Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...]
    
 0.901
RHNO1
RAD9-HUS1-RAD1 interacting nuclear orphan 1.
    
 0.895
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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