Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPANK1G-patch domain and ankyrin repeats 1. (356 aa)    
Predicted Functional Partners:
PPP1R18
Protein phosphatase 1 regulatory subunit 18.
      
 0.614
VWA7
Von Willebrand factor A domain containing 7.
      
 0.614
PRKRIP1
PRKR interacting protein 1.
   
  
 0.554
FAM32A
Family with sequence similarity 32 member A.
      
 0.520
DNAJA4
DnaJ heat shock protein family (Hsp40) member A4.
      
 0.485
SFXN5
Sidoreflexin.
      
 0.484
SDE2
SDE2 telomere maintenance homolog.
      
 0.479
LRRC28
Leucine rich repeat containing 28.
      
 0.468
FAM110A
Family with sequence similarity 110 member A.
      
 0.467
MRPL42
Mitochondrial ribosomal protein L42.
      
 0.456
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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