STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPN3Calpain 3; Belongs to the peptidase C2 family. (824 aa)    
Predicted Functional Partners:
TTN
Titin.
   
 0.921
MYOZ1
Myozenin 1.
   
  
 0.823
DYSF
Dysferlin.
      
 0.768
CAST
Calpastatin.
   
 0.765
CAPN12
Calpain 12; Belongs to the peptidase C2 family.
    
  0.743
CAPNS1
Calpain small subunit 1.
   
 0.672
SNCG
Gamma-synuclein; Belongs to the synuclein family.
      
 0.672
MYOT
Myotilin.
   
  
 0.662
RPL3L
Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.
   
  
 0.646
OBSCN
Obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF.
   
 0.642
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.