STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DEPDC5DEP domain-containing protein. (1594 aa)    
Predicted Functional Partners:
NPRL3
NPR3 like, GATOR1 complex subunit.
   
 0.999
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 0.999
WDR24
WD repeat domain 24.
   
 0.998
MIOS
Meiosis regulator for oocyte development.
    
 0.998
WDR59
WD repeat domain 59.
   
 0.997
RRAGB
Ras related GTP binding B.
    
 0.994
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.993
SEH1L
SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.
    
 0.991
C12orf66
Chromosome 12 open reading frame 66.
   
 0.978
ITFG2
Integrin alpha FG-GAP repeat containing 2.
    
 0.971
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.