STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF354AZinc finger protein 354A. (563 aa)    
Predicted Functional Partners:
ZNF354B
Zinc finger protein 354B.
   
    0.934
TRIM28
Tripartite motif containing 28.
   
 0.848
GPATCH4
G-patch domain containing 4.
    
   0.714
TRIM33
Tripartite motif containing 33.
   
 0.663
USP50
Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family.
      
 0.620
TRIM24
Tripartite motif containing 24.
   
  0.568
PSMB1
Proteasome subunit beta.
    
 0.500
LIN54
Lin-54 DREAM MuvB core complex component.
    
 
 0.487
DCTPP1
dCTP pyrophosphatase 1; Hydrolyzes deoxynucleoside triphosphates (dNTPs) to the corresponding nucleoside monophosphates. Has a strong preference for dCTP and its analogs including 5-iodo-dCTP and 5-methyl-dCTP for which it may even have a higher efficiency. May protect DNA or RNA against the incorporation of these genotoxic nucleotide analogs through their catabolism.
    
 0.483
SUPT5H
Transcription elongation factor SPT5.
    
 0.475
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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