STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLK4CDC like kinase 4; Belongs to the protein kinase superfamily. (481 aa)    
Predicted Functional Partners:
CLK1
CDC like kinase 1.
  
 
 
0.985
SRSF1
Uncharacterized protein.
   
 
 0.728
TRA2A
Transformer 2 alpha homolog.
   
 
 0.685
CLK2
CDC like kinase 2; Belongs to the protein kinase superfamily.
   
   0.685
CDC42BPB
CDC42 binding protein kinase beta.
    
 
 0.678
IRX1
Iroquois homeobox 1.
   
  
 0.625
RSRP1
Arginine and serine rich protein 1.
   
 
 0.579
STK16
Serine/threonine kinase 16.
   
  
 0.567
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 
 0.567
ANHX
Anomalous homeobox.
      
 0.550
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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