STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LY6G5CLymphocyte antigen 6 family member G5C. (148 aa)    
Predicted Functional Partners:
TRIM40
Tripartite motif containing 40.
      
 0.485
FAM189A1
Family with sequence similarity 189 member A1.
  
   
 0.484
ENSCSAP00000004381
Uncharacterized protein.
      
 0.474
ABT1
Activator of basal transcription 1.
      
 0.473
ENSCSAP00000014675
CS domain-containing protein.
      
 0.473
FLYWCH1
FLYWCH-type zinc finger 1.
  
     0.431
IFNAR2
Uncharacterized protein.
  
     0.412
TNFRSF1A
TNF receptor superfamily member 1A.
  
     0.410
TFAP2D
Transcription factor AP-2 delta.
      
 0.409
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.