Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECDEcdysoneless cell cycle regulator. (678 aa)    
Predicted Functional Partners:
AAR2
AAR2 splicing factor.
    
 
 0.932
ZNHIT2
Zinc finger HIT-type containing 2.
    
 
 0.920
TSSC4
Tumor suppressing subtransferable candidate 4.
    
 
 0.918
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.918
EAPP
E2F associated phosphoprotein.
    
   0.909
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.829
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.811
PIH1D1
PIH1 domain containing 1.
    
 
 0.803
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 
 0.796
KIAA1143
KIAA1143.
    
   0.767
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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