STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX41DEAD-box helicase 41. (622 aa)    
Predicted Functional Partners:
STING1
Transmembrane protein 173.
    
 0.975
CDC40
Cell division cycle 40.
    
 0.934
SLU7
SLU7 homolog, splicing factor.
    
  0.930
DHX8
DEAH-box helicase 8.
   
 0.919
TRIM21
Tripartite motif containing 21.
    
 0.911
FAM32A
Family with sequence similarity 32 member A.
    
 0.911
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.910
CACTIN
Cactin, spliceosome C complex subunit.
    
 0.910
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.903
SYF2
SYF2 pre-mRNA splicing factor.
    
  0.900
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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