STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC57Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
C5orf30
Chromosome 5 open reading frame 30.
    
   0.763
CDHR5
Cadherin related family member 5.
     
 0.702
LUM
Lumican.
  
     0.507
STARD9
StAR related lipid transfer domain containing 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.505
DNAJC17
DnaJ heat shock protein family (Hsp40) member C17.
   
  
 0.490
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 
 0.485
ZFYVE19
Zinc finger FYVE-type containing 19.
    
 0.476
ME2
Malic enzyme.
   
  
 0.476
IVD
Isovaleryl-CoA dehydrogenase.
      
 0.473
OMD
Osteomodulin.
  
     0.469
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.