STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP25Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. (1113 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.944
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.943
TRAF2
TNF receptor-associated factor.
   
 0.926
DDX58
DExD/H-box helicase 58.
   
 
 0.925
KCTD13
Potassium channel tetramerization domain containing 13.
    
 
 0.897
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.884
KCTD10
Potassium channel tetramerization domain containing 10.
    
 
 0.876
SYK
Tyrosine-protein kinase.
    
 0.843
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.836
SUMO2
Small ubiquitin-related modifier.
    
 
 0.809
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.