STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL4A5Collagen type IV alpha 5 chain. (882 aa)    
Predicted Functional Partners:
CD44
CD44 molecule (Indian blood group).
   
 0.906
COL4A1
Collagen type IV alpha 1 chain.
   
 0.904
ENSCSAP00000016261
Uncharacterized protein.
     
 0.900
COL4A6
Collagen IV NC1 domain-containing protein.
   
 0.876
COL8A2
Collagen type VIII alpha 2 chain.
    
 0.854
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
   
 0.829
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
      
 0.826
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.780
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
    
 0.768
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
   
 0.761
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.