Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PUF60Poly(U) binding splicing factor 60. (516 aa)    
Predicted Functional Partners:
SF3A2
Splicing factor 3a subunit 2.
   
 0.973
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.932
FUBP1
Far upstream element binding protein 1.
   
 
 0.929
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.927
SF3B3
Splicing factor 3b subunit 3.
    
 0.921
SAP30BP
SAP30 binding protein.
   
   0.918
SMNDC1
Survival motor neuron domain containing 1.
   
 0.915
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
 0.908
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.907
SF3B1
Splicing factor 3b subunit 1.
   
 0.902
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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