STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNKDPNKD metallo-beta-lactamase domain containing. (385 aa)    
Predicted Functional Partners:
PRRT2
Proline rich transmembrane protein 2.
    
 
 0.728
MAGEA11
MAGE family member A11.
    
   0.719
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
  
 0.693
ARHGAP24
Rho GTPase activating protein 24.
      
 0.690
TANC1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1.
      
 0.690
USP46
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
      
 0.673
AGAP1
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1.
      
 0.673
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
      
 0.673
PCDH10
Protocadherin 10.
      
 0.673
NEO1
Neogenin 1.
      
 0.672
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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