STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM62Transmembrane protein 62. (643 aa)    
Predicted Functional Partners:
CCNDBP1
Cyclin D1 binding protein 1.
    
 0.620
THOC6
THO complex 6.
      
 0.529
NECTIN2
Nectin cell adhesion molecule 2.
      
 0.520
TMEM132A
Transmembrane protein 132A.
     
 0.502
TMEM164
Transmembrane protein 164.
      
 0.469
CDHR2
Cadherin related family member 2.
    
 0.464
TMEM40
Transmembrane protein 40.
      
 0.440
SKIL
SKI like proto-oncogene.
      
 0.413
MAN1A1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.413
TOMM40
Translocase of outer mitochondrial membrane 40.
    
 
 0.410
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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