Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PGBD2PiggyBac transposable element derived 2. (592 aa)    
Predicted Functional Partners:
PGBD1
PiggyBac transposable element derived 1.
    
   0.765
SCAND1
SCAN domain containing 1.
    
 
 0.636
ZNF862
Zinc finger protein 862.
  
   
 0.620
ZNF496
Zinc finger protein 496.
    
 
 0.584
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
      
 0.557
PGBD5
PiggyBac transposable element derived 5.
    
 
 0.551
ZNF446
Zinc finger protein 446.
    
   0.546
ZNF213
Zinc finger protein 213.
    
   0.543
POGK
Pogo transposable element derived with KRAB domain.
      
 0.535
ZSCAN1
Zinc finger and SCAN domain containing 1.
    
 
 0.521
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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