STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM16Uncharacterized protein. (557 aa)    
Predicted Functional Partners:
CCDC22
Coiled-coil domain containing 22.
    
  0.779
COMMD2
COMM domain containing 2.
    
  0.778
COMMD1
Copper metabolism domain containing 1.
    
  0.709
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.703
MARCH1
RING-CH-type domain-containing protein.
      
 0.690
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.688
RBX1
Ring-box 1.
    
 0.686
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.596
LGALS3
Galectin.
    
 
 0.588
TRIM44
Tripartite motif containing 44.
  
   
 0.579
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.