STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM83HFamily with sequence similarity 83 member H. (1192 aa)    
Predicted Functional Partners:
CSNK1E
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.773
CSNK1D
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
    
 
 0.773
VRK3
VRK serine/threonine kinase 3.
    
 
 0.763
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
    
 
 0.722
CSNK1A1L
Casein kinase 1 alpha 1 like; Belongs to the protein kinase superfamily.
    
 
 0.722
SON
SON DNA binding protein.
    
 
 0.700
LAMB3
Laminin subunit beta 3.
   
  
 0.692
WDR72
WD repeat domain 72.
      
 0.670
VRK2
VRK serine/threonine kinase 2.
    
 
 0.669
COL17A1
Collagen type XVII alpha 1 chain.
      
 0.664
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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