STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TGM5Transglutaminase 5. (720 aa)    
Predicted Functional Partners:
DSG4
Desmoglein 4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
    
 0.720
GSDMA
Gasdermin A.
   
  
 0.704
TGM2
Transglutaminase 2.
    
   0.687
F13B
Coagulation factor XIII B chain.
    
 0.678
ACP4
Acid phosphatase 4; Belongs to the histidine acid phosphatase family.
      
 0.677
CCL27
C-C motif chemokine ligand 27.
      
 0.674
ACOX2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
    
 
 0.669
KLK8
Kallikrein related peptidase 8; Belongs to the peptidase S1 family.
    
 0.668
CDSN
Corneodesmosin.
   
 
 0.586
LIPM
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
      
 0.576
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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