STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SKIV2LSki2 like RNA helicase. (1246 aa)    
Predicted Functional Partners:
TTC37
Tetratricopeptide repeat domain 37.
   
 0.997
WDR61
WD repeat domain 61.
    
 0.985
EXOSC3
Exosome component 3.
   
 0.954
EXOSC2
Exosome component 2.
   
 0.946
EXOSC9
Exosome component 9.
   
 0.944
EXOSC4
Exosome component 4.
   
 0.930
EXOSC8
Exosome component 8.
   
 0.930
EXOSC1
Exosome component 1.
   
 0.924
EXOSC7
Exosome component 7.
   
 0.913
HBS1L
HBS1 like translational GTPase.
    
 0.911
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.