STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRDProtein tyrosine phosphatase receptor type D. (1916 aa)    
Predicted Functional Partners:
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.933
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
   
 0.910
SLITRK1
SLIT and NTRK like family member 1.
    
 0.900
PPFIA3
PTPRF interacting protein alpha 3.
    
 0.872
SLITRK2
SLIT and NTRK like family member 2.
    
 0.861
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
    
0.846
SLITRK3
SLIT and NTRK like family member 3.
   
 0.800
LRFN1
Leucine rich repeat and fibronectin type III domain containing 1.
   
 0.784
NLGN3
Neuroligin 3.
    
 
 0.779
NTRK3
Tyrosine-protein kinase receptor.
   
 0.719
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.