STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB2EF-hand calcium binding domain 2. (139 aa)    
Predicted Functional Partners:
GIN1
Gypsy retrotransposon integrase 1.
   
 
 0.625
GALNT2
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.606
TAX1BP1
Tax1 binding protein 1.
    
 0.563
CCM2
CCM2 scaffold protein.
    
 0.560
WDR90
WD repeat domain 90.
   
 0.499
ACTN2
Actinin alpha 2.
    
 0.496
EFCAB11
EF-hand calcium binding domain 11.
      
 0.474
TTLL7
Tubulin tyrosine ligase like 7.
      
 0.463
ENSCSAP00000013903
Uncharacterized protein.
   
 0.459
ATP1A4
Sodium/potassium-transporting ATPase subunit alpha.
   
 
 0.452
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.