STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (806 aa)    
Predicted Functional Partners:
HNRNPK
Uncharacterized protein.
   
 0.906
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.880
DHX9
DExH-box helicase 9.
   
 0.877
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.860
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.835
NCL
Nucleolin.
   
 
 0.829
HNRNPC
Heterogeneous nuclear ribonucleoprotein C (C1/C2).
   
 0.812
ENSCSAP00000001463
Uncharacterized protein.
   
 0.811
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.811
YBX1
Y-box binding protein 1.
   
 0.791
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.