STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD2Bromodomain containing 2. (613 aa)    
Predicted Functional Partners:
BRD3
Bromodomain containing 3.
  
 
 
0.789
BRD4
Bromodomain containing 4.
   
 
0.709
E2F1
E2F transcription factor 1.
    
 
 0.703
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
   
 
 0.671
LOC103221971
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.665
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 
 0.641
NSD3
Nuclear receptor binding SET domain protein 3.
   
 
 0.624
BRDT
Bromodomain testis associated.
  
 
 
0.597
TAF7L
TATA-box binding protein associated factor 7 like.
    
 
 0.571
TAF7
TATA-box binding protein associated factor 7.
    
 
 0.571
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.